How to Install and Uninstall jellyfish-examples Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: January 10,2025

1. Install "jellyfish-examples" package

Please follow the guidelines below to install jellyfish-examples on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                jellyfish-examples
            
                    
    
    Copied

2. Uninstall "jellyfish-examples" package

Please follow the steps below to uninstall jellyfish-examples on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                jellyfish-examples
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the jellyfish-examples package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: jellyfish-examples
Priority: optional
Section: universe/science
Installed-Size: 1750
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Source: jellyfish
Version: 2.2.4-2
Depends: jellyfish, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libjellyfish-2.0-2, libstdc++6 (>= 5.2)
Filename: pool/universe/j/jellyfish/jellyfish-examples_2.2.4-2_amd64.deb
Size: 443294
MD5sum: 4e5c930de3cdc81fc8e487759149236e
SHA1: 2e5fc15eaffb2fd3b4b3a67de7c31a5a0b456860
SHA256: 7aa5056232a75880e107ab01a7d2fe2b8a803014a4db5a93b2cd13dfde6d562c
Description-en: count k-mers in DNA sequences (examples for testing)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains examples to test the package
Description-md5: 70cd6238484ba024b031a85b283b1b27
Homepage: http://www.cbcb.umd.edu/software/jellyfish/
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu