mosdepth on AUR (Arch User Repository)

Last updated: November 23,2024

1. Install "mosdepth" effortlessly via AUR with the help of a helper(YAY)

a. Install YAY (https://github.com/Jguer/yay)


    
        
            $
        

        
            
                sudo pacman -S --needed git base-devel && git clone https://aur.archlinux.org/yay.git && cd yay && makepkg -si
            
                    
    
    Copied

b. Install mosdepth on Arch using YAY

* (Optional) Uninstall mosdepth on Arch using YAY

2. Manually Install "mosdepth" via AUR

a. Ensure you have the base development tools and git installed with:


    
        
            $
        

        
            
                sudo pacman -S --needed
            
                        
                base-devel git
            
                    
    
    Copied

b. Clone mosdepth's git locally


    
        
            $
        

        
            
                git clone https://aur.archlinux.org/mosdepth.git 
            
                        
                ~/mosdepth
            
                    
    
    Copied

c. Go to ~/mosdepth folder and install it


   
    
        
            $
        

        
            
                cd
            
                        
                ~/mosdepth
            
                    
    
    Copied

    

   
    
        
            $
        

        
            
                makepkg -si
            
                    
    
    Copied

3. Information about the mosdepth package on Arch User Repository (AUR)

ID: 1278741
Name: mosdepth
PackageBaseID: 126855
PackageBase: mosdepth
Version: 0.3.4-1
Description: Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
URL: https://github.com/brentp/mosdepth
NumVotes: 1
Popularity: 0
OutOfDate: 1696605485
Maintainer: meanjollies
Submitter: clintval
FirstSubmitted: 1509568476
LastModified: 1687748220
URLPath: /cgit/aur.git/snapshot/mosdepth.tar.gz