How to Install and Uninstall hisat2 Package on Debian 12 (Bookworm)

Last updated: February 02,2025

You can also install and uninstall the hisat2 on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "hisat2" package

Please follow the step by step instructions below to install hisat2 on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hisat2
            
                    
    
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2. Uninstall "hisat2" package

Learn how to uninstall hisat2 on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                hisat2
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hisat2 package on Debian 12 (Bookworm)

Package: hisat2
Source: hisat2 (2.2.1-4)
Version: 2.2.1-4+b2
Installed-Size: 14154
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), perl:any, python3
Recommends: python3-hisat2, bcftools, samtools
Description: graph-based alignment of short nucleotide reads to many genomes
Description-md5: 5f7b7bae1f6d1899a67fb91260ec0d0f
Homepage: https://daehwankimlab.github.io/hisat2/
Built-Using: simde (= 0.7.4~rc2-2)
Section: science
Priority: optional
Filename: pool/main/h/hisat2/hisat2_2.2.1-4+b2_amd64.deb
Size: 3658228
MD5sum: c2465b320da09260bf48cc787ba6f9de
SHA256: 350a7f690242019f023a74aad71983563b1381a72fe4eff24e9dabdb509dfb17