How to Install and Uninstall hisat2 Package on Ubuntu 20.04 LTS (Focal Fossa)

Last updated: November 22,2024

1. Install "hisat2" package

Please follow the step by step instructions below to install hisat2 on Ubuntu 20.04 LTS (Focal Fossa)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hisat2
            
                    
    
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2. Uninstall "hisat2" package

Please follow the guidance below to uninstall hisat2 on Ubuntu 20.04 LTS (Focal Fossa):


    
        
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                sudo apt remove
            
                        
                hisat2
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hisat2 package on Ubuntu 20.04 LTS (Focal Fossa)

Package: hisat2
Architecture: amd64
Version: 2.1.0-4
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 13400
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), perl:any, python3
Recommends: python3-hisat2, bcftools, samtools
Filename: pool/universe/h/hisat2/hisat2_2.1.0-4_amd64.deb
Size: 3381044
MD5sum: 3db75c9b212769cd9ea7946b7d07df79
SHA1: 97337d6a0d91b3ffcce9c83bebc8238dfb20ac80
SHA256: b37ca0e0e92a12473e1c6ceaee1fe75fbe42c6bdc0f4b99e39b5ed4f72dae780
Homepage: https://ccb.jhu.edu/software/hisat2/index.shtml
Description: graph-based alignment of short nucleotide reads to many genomes
Description-md5: 5f7b7bae1f6d1899a67fb91260ec0d0f