How to Install and Uninstall fastml Package on Kali Linux
Last updated: November 07,2024
1. Install "fastml" package
Here is a brief guide to show you how to install fastml on Kali Linux
$
sudo apt update
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$
sudo apt install
fastml
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2. Uninstall "fastml" package
Here is a brief guide to show you how to uninstall fastml on Kali Linux:
$
sudo apt remove
fastml
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$
sudo apt autoclean && sudo apt autoremove
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3. Information about the fastml package on Kali Linux
Package: fastml
Version: 3.11-4
Installed-Size: 3474
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1)
Size: 947800
SHA256: 634ccb85e706a2b3464c5ab1a16f78d7776fbc03662ca40d347ecd32a72e3c45
SHA1: 45e5877956ca5942f128bb400bd39e96fe16ef14
MD5sum: 8c2f6678d5b1700e093b18a0cb73d88e
Description: maximum likelihood ancestral amino-acid sequence reconstruction
FastML is a bioinformatics tool for the reconstruction of ancestral
sequences based on the phylogenetic relations between homologous
sequences. FastML runs several algorithms that reconstruct the ancestral
sequences with emphasis on an accurate reconstruction of both indels and
characters. For character reconstruction the previously described FastML
algorithms are used to efficiently infer the most likely ancestral
sequences for each internal node of the tree. Both joint and the
marginal reconstructions are provided. For indels reconstruction the
sequences are first coded according to the indel events detected within
the multiple sequence alignment (MSA) and then a state-of-the-art
likelihood model is used to reconstruct ancestral indels states. The
results are the most probable sequences, together with posterior
probabilities for each character and indel at each sequence position for
each internal node of the tree. FastML is generic and is applicable for
any type of molecular sequences (nucleotide, protein, or codon
sequences).
Description-md5:
Homepage: http://fastml.tau.ac.il/
Section: science
Priority: optional
Filename: pool/main/f/fastml/fastml_3.11-4_amd64.deb
Version: 3.11-4
Installed-Size: 3474
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1)
Size: 947800
SHA256: 634ccb85e706a2b3464c5ab1a16f78d7776fbc03662ca40d347ecd32a72e3c45
SHA1: 45e5877956ca5942f128bb400bd39e96fe16ef14
MD5sum: 8c2f6678d5b1700e093b18a0cb73d88e
Description: maximum likelihood ancestral amino-acid sequence reconstruction
FastML is a bioinformatics tool for the reconstruction of ancestral
sequences based on the phylogenetic relations between homologous
sequences. FastML runs several algorithms that reconstruct the ancestral
sequences with emphasis on an accurate reconstruction of both indels and
characters. For character reconstruction the previously described FastML
algorithms are used to efficiently infer the most likely ancestral
sequences for each internal node of the tree. Both joint and the
marginal reconstructions are provided. For indels reconstruction the
sequences are first coded according to the indel events detected within
the multiple sequence alignment (MSA) and then a state-of-the-art
likelihood model is used to reconstruct ancestral indels states. The
results are the most probable sequences, together with posterior
probabilities for each character and indel at each sequence position for
each internal node of the tree. FastML is generic and is applicable for
any type of molecular sequences (nucleotide, protein, or codon
sequences).
Description-md5:
Homepage: http://fastml.tau.ac.il/
Section: science
Priority: optional
Filename: pool/main/f/fastml/fastml_3.11-4_amd64.deb