How to Install and Uninstall hhsuite Package on Kali Linux

Last updated: November 26,2024

1. Install "hhsuite" package

This is a short guide on how to install hhsuite on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                hhsuite
            
                    
    
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2. Uninstall "hhsuite" package

Here is a brief guide to show you how to uninstall hhsuite on Kali Linux:


    
        
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                sudo apt remove
            
                        
                hhsuite
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the hhsuite package on Kali Linux

Package: hhsuite
Version: 3.3.0+ds-8
Installed-Size: 464795
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libstdc++6 (>= 13.1), perl:any, hhsuite-data (= 3.3.0+ds-8), python3
Conflicts: ffindex
Size: 55136564
SHA256: 941913ec51d0cd7385c36c57afecdbf913b6e1c24bd442ef6ed637e4e5da48a0
SHA1: 05d1054875821576cff7b9f85b2e910497d5773e
MD5sum: 9b08405f4d321fabe6fe7403be4e9b3f
Description: sensitive protein sequence searching based on HMM-HMM alignment
HH-suite is an open-source software package for sensitive protein sequence
searching based on the pairwise alignment of hidden Markov models (HMMs).
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This package contains HHsearch and HHblits among other programs and utilities.
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HHsearch takes as input a multiple sequence alignment (MSA) or profile HMM
and searches a database of HMMs (e.g. PDB, Pfam, or InterPro) for homologous
proteins. HHsearch is often used for protein structure prediction to detect
homologous templates and to build highly accurate query-template pairwise
alignments for homology modeling.
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HHblits can build high-quality MSAs starting from single sequences or from
MSAs. It transforms these into a query HMM and, using an iterative search
strategy, adds significantly similar sequences from the previous search to
the updated query HMM for the next search iteration. Compared to PSI-BLAST,
HHblits is faster, up to twice as sensitive and produces more accurate
alignments.
Description-md5:
Homepage: https://toolkit.tuebingen.mpg.de/
Built-Using: simde (= 0.7.6-1)
Section: science
Priority: optional
Filename: pool/main/h/hhsuite/hhsuite_3.3.0+ds-8_amd64.deb