How to Install and Uninstall ivar Package on Kali Linux

Last updated: May 19,2024

1. Install "ivar" package

This guide covers the steps necessary to install ivar on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                ivar
            
                    
    
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2. Uninstall "ivar" package

Please follow the instructions below to uninstall ivar on Kali Linux:


    
        
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                sudo apt remove
            
                        
                ivar
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the ivar package on Kali Linux

Package: ivar
Version: 1.4.2+dfsg-3
Installed-Size: 1518
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libhts3 (>= 1.17), libstdc++6 (>= 13.1)
Recommends: samtools
Size: 227648
SHA256: a8f2244092c53d5813f469137f5afa0a5aff98c0daab2dc09e906126ccc7a872
SHA1: a9f8cdd9300018a982b852443a9587c94d2dd6dd
MD5sum: 92a062a1bdafdd157efad240434ff58b
Description: functions broadly useful for viral amplicon-based sequencing
iVar is a computational package that contains functions broadly useful
for viral amplicon-based sequencing. Additional tools for metagenomic
sequencing are actively being incorporated into iVar. While each of
these functions can be accomplished using existing tools, iVar contains
an intersection of functionality from multiple tools that are required
to call iSNVs and consensus sequences from viral sequencing data across
multiple replicates. iVar provided the following functions:
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1. trimming of primers and low-quality bases,
2. consensus calling,
3. variant calling - both iSNVs and insertions/deletions, and
4. identifying mismatches to primer sequences and excluding the
corresponding reads from alignment files.
Description-md5:
Homepage: https://github.com/andersen-lab/ivar
Section: science
Priority: optional
Filename: pool/main/i/ivar/ivar_1.4.2+dfsg-3_amd64.deb