How to Install and Uninstall pscan-tfbs Package on Kali Linux

Last updated: November 22,2024

1. Install "pscan-tfbs" package

This is a short guide on how to install pscan-tfbs on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                pscan-tfbs
            
                    
    
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2. Uninstall "pscan-tfbs" package

Please follow the guidance below to uninstall pscan-tfbs on Kali Linux:


    
        
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                sudo apt remove
            
                        
                pscan-tfbs
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the pscan-tfbs package on Kali Linux

Package: pscan-tfbs
Source: pscan-tfbs (1.2.2-4)
Version: 1.2.2-4+b2
Installed-Size: 185
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgsl27 (>= 2.7.1), libstdc++6 (>= 11)
Size: 71532
SHA256: 2f119a106479aeb65c43caf078858066a77b123799f53f4f66bebfd0dccdc7be
SHA1: ddbbcf6ff66119da86607d67e7945a98cdd40951
MD5sum: 986419b986251f7b48debdc0df83100c
Description: search for transcription factor binding sites
Pscan finds Over-represented Transcription Factor Binding Site Motifs in
Sequences from Co-Regulated or Co-Expressed Genes.
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Pscan is a software tool that scans a set of sequences (e.g. promoters)
from co-regulated or co-expressed genes with motifs describing the
binding specificity of known transcription factors and assesses which
motifs are significantly over- or under-represented, providing thus
hints on which transcription factors could be common regulators of the
genes studied, together with the location of their candidate binding
sites in the sequences. Pscan does not resort to comparisons with
orthologous sequences and experimental results show that it compares
favorably to other tools for the same task in terms of false positive
predictions and computation time. The website is free and open to all
users and there is no login requirement.
Description-md5:
Homepage: http://www.beaconlab.it/pscan
Section: science
Priority: optional
Filename: pool/main/p/pscan-tfbs/pscan-tfbs_1.2.2-4+b2_amd64.deb