How to Install and Uninstall r-bioc-demixt Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 26,2024

1. Install "r-bioc-demixt" package

Learn how to install r-bioc-demixt on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-demixt
            
                    
    
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2. Uninstall "r-bioc-demixt" package

Learn how to uninstall r-bioc-demixt on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-demixt
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-demixt package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-demixt
Architecture: amd64
Version: 1.4.0-1build1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4796
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-cran-rcpp (>= 1.0.0), r-bioc-summarizedexperiment, r-cran-knitr, r-cran-kernsmooth, r-cran-matrixcalc, r-cran-matrixstats, r-cran-truncdist, r-cran-base64enc, r-cran-ggplot2, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libstdc++6 (>= 5.2)
Recommends: r-cran-rmarkdown
Filename: pool/universe/r/r-bioc-demixt/r-bioc-demixt_1.4.0-1build1_amd64.deb
Size: 4416084
MD5sum: 1f8166ac17b0ade4cbc4f00ba3bd1958
SHA1: df22421f94d0cd9a0aa61987455fc6b771fd4117
SHA256: e5e8b7825eec149b47026fc8b1f561b33b2a5e72db381cdc81a504e3c0aafdfd
SHA512: 35f41b63f4e2dc7096e13bbddd0fef833f6f45b3ae9d77cb0a1c7ee4de106481822478043334ab56b38dd9ca5947976d8420083de56191e0764ad559bf335269
Homepage: https://bioconductor.org/packages/DeMixT/
Description-en: Cell type-specific deconvolution of heterogeneous tumor samples
When studying cancer cells from tumors excised from patients, the samples
will be a mixture of tumors and healthy cells, e.g. from invading immune cells.
For comparing samples, the interest may be more on comparing the transcriptome
of the tumors themselves.
.
This package prepares the statistical separation (deconvolution)
of RNAseq or microarray generated expression data for two or three
components.
Description-md5: 232ccbc62f7dee4f47f5ff735b6b62ff