How to Install and Uninstall r-bioc-demixt Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 05,2024

1. Install "r-bioc-demixt" package

Please follow the steps below to install r-bioc-demixt on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-demixt
            
                    
    
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2. Uninstall "r-bioc-demixt" package

This guide covers the steps necessary to uninstall r-bioc-demixt on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-demixt
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-demixt package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-demixt
Architecture: amd64
Version: 1.6.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4973
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-cran-rcpp (>= 1.0.0), r-bioc-summarizedexperiment, r-cran-knitr, r-cran-kernsmooth, r-cran-matrixcalc, r-cran-matrixstats, r-cran-truncdist, r-cran-base64enc, r-cran-ggplot2, libc6 (>= 2.29), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libstdc++6 (>= 5.2)
Recommends: r-cran-rmarkdown
Filename: pool/universe/r/r-bioc-demixt/r-bioc-demixt_1.6.0-1_amd64.deb
Size: 4545532
MD5sum: 37e0b7af9acbd99962f07dbba50a6cb4
SHA1: fcbd91a355c117fbdef227aaa0f32b9e3b814fa1
SHA256: eacb2e0b08eb67216da089596ee36b3afed584e0f14fe7ff2e40d2d604450f9d
SHA512: 4e57c8ce42bf5758af4cb93e6166ba98f5499d78204339ce9783c63c3ab79a39e6caec43f6668fb10fe81f4fda1009cf19e5ba29850160d169c59083212ac503
Homepage: https://bioconductor.org/packages/DeMixT/
Description-en: Cell type-specific deconvolution of heterogeneous tumor samples
When studying cancer cells from tumors excised from patients, the samples
will be a mixture of tumors and healthy cells, e.g. from invading immune cells.
For comparing samples, the interest may be more on comparing the transcriptome
of the tumors themselves.
.
This package prepares the statistical separation (deconvolution)
of RNAseq or microarray generated expression data for two or three
components.
Description-md5: 232ccbc62f7dee4f47f5ff735b6b62ff