How to Install and Uninstall r-bioc-genomicalignments Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: November 07,2024

1. Install "r-bioc-genomicalignments" package

Please follow the guidance below to install r-bioc-genomicalignments on Ubuntu 20.10 (Groovy Gorilla)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-genomicalignments
            
                    
    
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2. Uninstall "r-bioc-genomicalignments" package

Please follow the steps below to uninstall r-bioc-genomicalignments on Ubuntu 20.10 (Groovy Gorilla):


    
        
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                sudo apt remove
            
                        
                r-bioc-genomicalignments
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-genomicalignments package on Ubuntu 20.10 (Groovy Gorilla)

Package: r-bioc-genomicalignments
Architecture: amd64
Version: 1.24.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2994
Depends: r-base-core (>= 4.0.0.20200528-1), r-api-4.0, r-api-bioc-3.11, r-bioc-biocgenerics (>= 0.15.3), r-bioc-s4vectors (>= 0.25.14), r-bioc-iranges (>= 2.21.6), r-bioc-genomeinfodb (>= 1.13.1), r-bioc-genomicranges (>= 1.39.3), r-bioc-summarizedexperiment (>= 1.9.13), r-bioc-biostrings (>= 2.55.7), r-bioc-rsamtools (>= 1.31.2), r-bioc-biocparallel, libc6 (>= 2.4)
Recommends: r-cran-runit, r-bioc-shortread (>= 1.24.0)
Suggests: r-bioc-rtracklayer, r-bioc-bsgenome, r-bioc-genomicfeatures, r-bioc-deseq2, r-bioc-edger
Filename: pool/universe/r/r-bioc-genomicalignments/r-bioc-genomicalignments_1.24.0-1_amd64.deb
Size: 2205368
MD5sum: a2fbd4a73a26860fcd72cdb1a26ac249
SHA1: 55a47ae40f6797945f965746e12464f763315d92
SHA256: 65939f8b018e2cd170f1309294ec68cc0bc545152b45c186704d6fa04aba00c4
SHA512: 4f2c9a2eaa1bd92ec4862c4412dea921b6bd2dd9578ef93e3823b37625fd0d9449aa7ee2128962f883148884c4ee0e51a018da47116e21dbb518a958dbb25154
Homepage: https://bioconductor.org/packages/GenomicAlignments/
Description-en: BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and
manipulating short genomic alignments (typically obtained by aligning
short reads to a reference genome). This includes read counting,
computing the coverage, junction detection, and working with the
nucleotide content of the alignments.
Description-md5: d50adaf82639cc220ed4e6e1e258c6d5