How to Install and Uninstall r-bioc-genomicalignments Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 10,2024

1. Install "r-bioc-genomicalignments" package

Please follow the guidelines below to install r-bioc-genomicalignments on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-genomicalignments
            
                    
    
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2. Uninstall "r-bioc-genomicalignments" package

Here is a brief guide to show you how to uninstall r-bioc-genomicalignments on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-genomicalignments
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-genomicalignments package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-genomicalignments
Architecture: amd64
Version: 1.26.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 2987
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.15.3), r-bioc-s4vectors (>= 0.27.12), r-bioc-iranges (>= 2.23.9), r-bioc-genomeinfodb (>= 1.13.1), r-bioc-genomicranges (>= 1.41.5), r-bioc-summarizedexperiment (>= 1.9.13), r-bioc-biostrings (>= 2.55.7), r-bioc-rsamtools (>= 1.31.2), r-bioc-biocparallel, libc6 (>= 2.4)
Recommends: r-cran-runit, r-bioc-shortread (>= 1.24.0)
Suggests: r-bioc-rtracklayer, r-bioc-bsgenome, r-bioc-genomicfeatures, r-bioc-deseq2, r-bioc-edger, r-bioc-biocstyle
Filename: pool/universe/r/r-bioc-genomicalignments/r-bioc-genomicalignments_1.26.0-1_amd64.deb
Size: 2195388
MD5sum: 9b98575fae12257dccadec2692cbe0f8
SHA1: d6b7d8887dcb8998d895089bb8b49251fbb315a4
SHA256: 9a8156cdf641a3667aebb3fa1d6543453a7d2158295d2dcee6e278cead3e9793
SHA512: 8d0d293e21f1543baab04f110014e8b62e79ca6d5b5d395e739a7222470351177b59bf8bffdf968bde468ccacfe54705aa77cf56772ca44838948655df81168c
Homepage: https://bioconductor.org/packages/GenomicAlignments/
Description-en: BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and
manipulating short genomic alignments (typically obtained by aligning
short reads to a reference genome). This includes read counting,
computing the coverage, junction detection, and working with the
nucleotide content of the alignments.
Description-md5: d50adaf82639cc220ed4e6e1e258c6d5