How to Install and Uninstall spades Package on Ubuntu 20.10 (Groovy Gorilla)

Last updated: May 22,2024

1. Install "spades" package

This tutorial shows how to install spades on Ubuntu 20.10 (Groovy Gorilla)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                spades
            
                    
    
    Copied

2. Uninstall "spades" package

This guide let you learn how to uninstall spades on Ubuntu 20.10 (Groovy Gorilla):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                spades
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the spades package on Ubuntu 20.10 (Groovy Gorilla)

Package: spades
Architecture: amd64
Version: 3.13.1+dfsg-2build2
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 23316
Depends: libc6 (>= 2.29), libgcc-s1 (>= 4.0), libgomp1 (>= 6), libhat-trie0, libnlopt0 (>= 2.6.1), libssw0 (>= 1.1), libstdc++6 (>= 9), zlib1g (>= 1:1.2.3.3), python3:any, python3, python3-distutils, python3-joblib, python3-yaml, bwa, bamtools, samtools
Filename: pool/universe/s/spades/spades_3.13.1+dfsg-2build2_amd64.deb
Size: 4928232
MD5sum: 849ad4a4ea27e821854a3c08f3c9ede5
SHA1: 6274211a51335e13304fc4f897273354a3d567de
SHA256: 11cbaba04067da276641c10b69a9ad3beac698f7a3c15332348285f734ef9011
SHA512: 4d3e5a4d231d6da02994ff408f5017c43c35c529cb20e2fc2edf71962d1ef964e2253b445709f913d4747c977e5dbe5b9759ff40ab9027e8a3232b9199c922cb
Homepage: http://cab.spbu.ru/software/spades/
Description-en: genome assembler for single-cell and isolates data sets
The SPAdes – St. Petersburg genome assembler is intended for both
standard isolates and single-cell MDA bacteria assemblies. It works
with Illumina or IonTorrent reads and is capable of providing hybrid
assemblies using PacBio and Sanger reads. You can also provide
additional contigs that will be used as long reads.
Description-md5: a8af60ccfdd2e159193efb52065bef14