How to Install and Uninstall spades Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "spades" package

This guide covers the steps necessary to install spades on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                spades
            
                    
    
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2. Uninstall "spades" package

Please follow the instructions below to uninstall spades on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                spades
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the spades package on Ubuntu 21.10 (Impish Indri)

Package: spades
Architecture: amd64
Version: 3.13.1+dfsg-2build3
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 22884
Depends: libc6 (>= 2.29), libgcc-s1 (>= 4.0), libgomp1 (>= 6), libhat-trie0, libnlopt0 (>= 2.6.1), libssw0 (>= 1.1), libstdc++6 (>= 9), zlib1g (>= 1:1.2.3.3), python3:any, python3, python3-distutils, python3-joblib, python3-yaml, bwa, bamtools, samtools
Filename: pool/universe/s/spades/spades_3.13.1+dfsg-2build3_amd64.deb
Size: 4794280
MD5sum: 9ae14eff57838e430c88b6cd44ba9889
SHA1: 2ee5e06505f70e67805e0d336edd0b6f52855aa7
SHA256: 25b745b040d5d0f3361c47e3c45c428283b409b5f60a6ba0dfe1398ffcf4e42d
SHA512: 4dc54f5505ceb24a18b1c2f73025e7d46958b599cb92051deb2996ec1f0ecb73dbc3879d1d7dedbc4fd7ef45effc3583fbd2f94a950a2dcf9ba6133b126e979e
Homepage: http://cab.spbu.ru/software/spades/
Description-en: genome assembler for single-cell and isolates data sets
The SPAdes – St. Petersburg genome assembler is intended for both
standard isolates and single-cell MDA bacteria assemblies. It works
with Illumina or IonTorrent reads and is capable of providing hybrid
assemblies using PacBio and Sanger reads. You can also provide
additional contigs that will be used as long reads.
Description-md5: a8af60ccfdd2e159193efb52065bef14