How to Install and Uninstall ivar-doc Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 18,2024

1. Install "ivar-doc" package

Learn how to install ivar-doc on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                ivar-doc
            
                    
    
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2. Uninstall "ivar-doc" package

This guide let you learn how to uninstall ivar-doc on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                ivar-doc
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the ivar-doc package on Ubuntu 21.10 (Impish Indri)

Package: ivar-doc
Architecture: all
Version: 1.3.1+dfsg-4
Multi-Arch: foreign
Priority: optional
Section: universe/doc
Source: ivar
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 1131
Depends: node-jquery
Filename: pool/universe/i/ivar/ivar-doc_1.3.1+dfsg-4_all.deb
Size: 247362
MD5sum: 97a1156ce7770f69c001037c16219c8b
SHA1: 5b943dd8fd111b804466ae65246b2056d334fa3d
SHA256: 03bc8b496018a376b34f5cefc3eb24d8a7bb1d75c93c515115ff13155e1b68b7
SHA512: 33b81864dcb4a884008c2844082510dfb74be5f83292b76a75ce045fbad632f60cd51ee969c964e26edba2adbf478f99520dff8d4cdf7d2db954ab85d9e65241
Homepage: https://github.com/andersen-lab/ivar
Description-en: functions broadly useful for viral amplicon-based sequencing (documentation)
iVar is a computational package that contains functions broadly useful
for viral amplicon-based sequencing. Additional tools for metagenomic
sequencing are actively being incorporated into iVar. While each of
these functions can be accomplished using existing tools, iVar contains
an intersection of functionality from multiple tools that are required
to call iSNVs and consensus sequences from viral sequencing data across
multiple replicates. iVar provided the following functions:
.
1. trimming of primers and low-quality bases,
2. consensus calling,
3. variant calling - both iSNVs and insertions/deletions, and
4. identifying mismatches to primer sequences and excluding the
corresponding reads from alignment files.
.
This package contains the html documentation for ivar.
Description-md5: 736ba4389df927a42fc4994f365e6b43