How to Install and Uninstall r-bioc-dnacopy Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 20,2024

1. Install "r-bioc-dnacopy" package

This guide let you learn how to install r-bioc-dnacopy on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-bioc-dnacopy
            
                    
    
    Copied

2. Uninstall "r-bioc-dnacopy" package

Please follow the instructions below to uninstall r-bioc-dnacopy on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                r-bioc-dnacopy
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-dnacopy package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-dnacopy
Architecture: amd64
Version: 1.64.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 525
Depends: r-base-core (>= 4.0.2-1build1), r-api-4.0, r-api-bioc-3.12, libc6 (>= 2.29), libgfortran5 (>= 10)
Filename: pool/universe/r/r-bioc-dnacopy/r-bioc-dnacopy_1.64.0-1_amd64.deb
Size: 419236
MD5sum: e1ee3846d6b01e124e54e1dea766a229
SHA1: 81deefb40a0c0751f7e37c62888a2aefbbda576e
SHA256: 19652d52b417997bbbea3e86ea6efe308fc3fe1be0de0473c763e9f4cbb4dedb
SHA512: 6056386742fd0b9c7222ff45e8f2fcfae84676182da940e520ade20d81e7dd6d26987e6cd1c1fc7521de2d5c85c09072603777c92923813e5c8020f51fc4f0b9
Homepage: https://www.bioconductor.org/packages/DNAcopy/
Description-en: R package: DNA copy number data analysis
Implements the circular binary segmentation (CBS) algorithm to segment DNA
copy number data and identify genomic regions with abnormal copy number.
.
This package is for analyzing array DNA copy number data, which is usually
(but not always) called array Comparative Genomic Hybridization (array CGH)
data It implements a methodology for finding change-points in these data which
are points after which the (log) test over reference ratios have changed
location. This model is that the change-points correspond to positions where
the underlying DNA copy number has changed. Therefore, change-points can be
used to identify regions of gained and lost copy number. Also provided is a
function for making relevant plots of these data.
Description-md5: 04b2d7285fe6dc95b253d19cdc336532