How to Install and Uninstall r-bioc-genomicfeatures Package on Ubuntu 21.10 (Impish Indri)

Last updated: September 20,2024

1. Install "r-bioc-genomicfeatures" package

Here is a brief guide to show you how to install r-bioc-genomicfeatures on Ubuntu 21.10 (Impish Indri)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-bioc-genomicfeatures
            
                    
    
    Copied

2. Uninstall "r-bioc-genomicfeatures" package

This guide let you learn how to uninstall r-bioc-genomicfeatures on Ubuntu 21.10 (Impish Indri):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                r-bioc-genomicfeatures
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-genomicfeatures package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-genomicfeatures
Architecture: all
Version: 1.42.1+dfsg-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 4660
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.1.0), r-bioc-s4vectors (>= 0.17.29), r-bioc-iranges (>= 2.13.23), r-bioc-genomeinfodb (>= 1.25.7), r-bioc-genomicranges (>= 1.31.17), r-bioc-annotationdbi (>= 1.41.4), r-cran-dbi, r-cran-rsqlite (>= 2.0), r-cran-rcurl, r-bioc-xvector (>= 0.19.7), r-bioc-biostrings (>= 2.47.6), r-bioc-rtracklayer (>= 1.39.7), r-bioc-biomart (>= 2.17.1), r-bioc-biobase (>= 2.15.1)
Suggests: r-bioc-org.hs.eg.db, r-bioc-bsgenome, r-bioc-rsamtools, r-bioc-genomicalignments (>= 1.15.7), r-bioc-ensembldb, r-cran-runit, r-bioc-biocstyle, r-cran-knitr
Filename: pool/universe/r/r-bioc-genomicfeatures/r-bioc-genomicfeatures_1.42.1+dfsg-1_all.deb
Size: 1834572
MD5sum: f6a4e9f6f130dd7f1d132342aed8d7d7
SHA1: 10dd96515cc4dde6e588ac192eb83dd3ed30ee6a
SHA256: 5e5c9682450c742ad5340264971d886d5f9255cabfff745b6c2f8a80d15b4054
SHA512: f3461821f5937d3e79a75567a8b9a9a569730287f3cd8095255e32d797ea3df9a9d38e5a29171dde8717f6137fb5423f0ba962f9a8d4986e01baa6fe6b845258
Homepage: https://bioconductor.org/packages/GenomicFeatures/
Description-en: GNU R tools for making and manipulating transcript centric annotations
A set of tools and methods for making and manipulating transcript
centric annotations. With these tools the user can easily download the
genomic locations of the transcripts, exons and cds of a given organism,
from either the UCSC Genome Browser or a BioMart database (more sources
will be supported in the future). This information is then stored in a
local database that keeps track of the relationship between transcripts,
exons, cds and genes. Flexible methods are provided for extracting the
desired features in a convenient format.
Description-md5: d534bd4faeaf5a9823825797ab564bb0