How to Install and Uninstall gmap Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: May 10,2024

1. Install "gmap" package

In this section, we are going to explain the necessary steps to install gmap on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                gmap
            
                    
    
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2. Uninstall "gmap" package

Please follow the step by step instructions below to uninstall gmap on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                gmap
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the gmap package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: gmap
Priority: optional
Section: multiverse/science
Installed-Size: 67448
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 2015-12-31.v7-1
Depends: perl, libbz2-1.0, libc6 (>= 2.14), zlib1g (>= 1:1.2.6)
Filename: pool/multiverse/g/gmap/gmap_2015-12-31.v7-1_amd64.deb
Size: 9046698
MD5sum: 2da0bb62926e5d348e55b98c72a984ae
SHA1: a75c21e64f2c607a798c78ceb7493b9cd006cd18
SHA256: 1a845c901ecc5fc395e578b2be22d05fb85eb7f36838df9a52739b75f2154b6e
Description-en: spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
Description-md5: d1daaf58e59d1f735c184407a7d778b3
Homepage: http://research-pub.gene.com/gmap
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu