How to Install and Uninstall cnvkit Package on Debian 12 (Bookworm)

Last updated: November 26,2024

You can also install and uninstall the cnvkit on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "cnvkit" package

This is a short guide on how to install cnvkit on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cnvkit
            
                    
    
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2. Uninstall "cnvkit" package

Please follow the step by step instructions below to uninstall cnvkit on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                cnvkit
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cnvkit package on Debian 12 (Bookworm)

Package: cnvkit
Source: cnvkit (0.9.9-2)
Version: 0.9.9-2+b1
Installed-Size: 69065
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3-biopython, python3-joblib, python3-matplotlib, python3-networkx, python3-numpy, python3-pandas, python3-pomegranate, python3-pyfaidx, python3-pysam, python3-reportlab, python3-scipy, python3-sklearn, python3:any, r-bioc-dnacopy
Description: Copy number variant detection from targeted DNA sequencing
Description-md5: 0b8ab5ba6be9de3379277ab7a92a7b5d
Homepage: http://cnvkit.readthedocs.org
Section: science
Priority: optional
Filename: pool/main/c/cnvkit/cnvkit_0.9.9-2+b1_amd64.deb
Size: 15425488
MD5sum: 5cfed4dd3f195add8141e1a3bf795500
SHA256: b773bb7977d6fc9462b53b684aa74b7bd980387e48df07461a504d12742fcda0