How to Install and Uninstall cnvkit Package on Ubuntu 20.04 LTS (Focal Fossa)

Last updated: November 22,2024

1. Install "cnvkit" package

Please follow the guidance below to install cnvkit on Ubuntu 20.04 LTS (Focal Fossa)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cnvkit
            
                    
    
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2. Uninstall "cnvkit" package

This tutorial shows how to uninstall cnvkit on Ubuntu 20.04 LTS (Focal Fossa):


    
        
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                sudo apt remove
            
                        
                cnvkit
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cnvkit package on Ubuntu 20.04 LTS (Focal Fossa)

Package: cnvkit
Architecture: amd64
Version: 0.9.6-3
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 69024
Depends: python3-biopython, python3-future, python3-matplotlib, python3-numpy, python3-pandas, python3-pomegranate (>= 0.9.0), python3-pyfaidx, python3-pysam, python3-reportlab, python3-scipy, python3:any, r-bioc-dnacopy
Filename: pool/universe/c/cnvkit/cnvkit_0.9.6-3_amd64.deb
Size: 15426576
MD5sum: 277712ea36a4b71a5a1b253b1741d807
SHA1: 43f019d33d9f6a7eb6a6acc32c724a80adaa485b
SHA256: 7a6456aba263be419f3e3c3d9a34c2b5429a98d9dc25c4336bb5686fd37ad67f
Homepage: http://cnvkit.readthedocs.org
Description: Copy number variant detection from targeted DNA sequencing
Description-md5: 0b8ab5ba6be9de3379277ab7a92a7b5d