How to Install and Uninstall cnvkit Package on Kali Linux

Last updated: September 20,2024

Deprecated! Installation of this package may no longer be supported.

1. Install "cnvkit" package

Please follow the instructions below to install cnvkit on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                cnvkit
            
                    
    
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2. Uninstall "cnvkit" package

Please follow the guidance below to uninstall cnvkit on Kali Linux:


    
        
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                sudo apt remove
            
                        
                cnvkit
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the cnvkit package on Kali Linux

Package: cnvkit
Version: 0.9.10-1
Installed-Size: 94730
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: python3-biopython, python3-matplotlib, python3-numpy, python3-pandas, python3-pomegranate, python3-pyfaidx, python3-pysam, python3-reportlab, python3-scipy, python3-sklearn, python3:any, r-bioc-dnacopy
Size: 19499320
SHA256: d9b81720e462973eaef1dfb86f663a5573e32c2c9ed164aab8cc11ec0afb04ed
SHA1: 13976d1fa828448efe7812ad5b8f2f2a14a28683
MD5sum: a42d27d68dadf51a09216d9e2f4473a3
Description: Copy number variant detection from targeted DNA sequencing
A command-line toolkit and Python library for detecting copy number variants
and alterations genome-wide from targeted DNA sequencing. It is designed for
use with hybrid capture, including both whole-exome and custom target panels,
and short-read sequencing platforms such as Illumina and Ion Torrent.
Description-md5:
Homepage: https://cnvkit.readthedocs.org
Section: science
Priority: optional
Filename: pool/main/c/cnvkit/cnvkit_0.9.10-1_amd64.deb