How to Install and Uninstall lumpy-sv Package on Kali Linux

Last updated: November 22,2024

1. Install "lumpy-sv" package

Learn how to install lumpy-sv on Kali Linux


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                lumpy-sv
            
                    
    
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2. Uninstall "lumpy-sv" package

In this section, we are going to explain the necessary steps to uninstall lumpy-sv on Kali Linux:


    
        
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                sudo apt remove
            
                        
                lumpy-sv
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the lumpy-sv package on Kali Linux

Package: lumpy-sv
Version: 0.3.1+dfsg-7
Installed-Size: 656
Maintainer: Debian Med Packaging Team
Architecture: amd64
Depends: libbamtools2.5.2 (>= 2.5.2+dfsg), libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgzstream0 (>= 1.5+dfsg), libhts3 (>= 1.10), libstdc++6 (>= 11), python3:any, samblaster, samtools, python3, python3-pysam, python3-numpy, bamkit
Recommends: sambamba
Size: 195296
SHA256: 58de2a437b6a9ece539737b73f9bfe84c4a41380357952980a53224701f3a857
SHA1: 6e6f024c6783dca92f36ad7c430f048bf51bfb91
MD5sum: 5c108858449885d7c752f2f8f64194ea
Description: general probabilistic framework for structural variant discovery
LUMPY, a novel SV discovery framework that naturally integrates multiple
SV signals jointly across multiple samples. LUMPY yields improved
sensitivity, especially when SV signal is reduced owing to either low
coverage data or low intra-sample variant allele frequency.
Description-md5:
Homepage: https://github.com/arq5x/lumpy-sv
Section: science
Priority: optional
Filename: pool/main/l/lumpy-sv/lumpy-sv_0.3.1+dfsg-7_amd64.deb