How to Install and Uninstall lumpy-sv Package on Ubuntu 23.10 (Mantic Minotaur)

Last updated: May 08,2024

1. Install "lumpy-sv" package

Please follow the guidelines below to install lumpy-sv on Ubuntu 23.10 (Mantic Minotaur)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                lumpy-sv
            
                    
    
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2. Uninstall "lumpy-sv" package

Please follow the step by step instructions below to uninstall lumpy-sv on Ubuntu 23.10 (Mantic Minotaur):


    
        
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                sudo apt remove
            
                        
                lumpy-sv
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the lumpy-sv package on Ubuntu 23.10 (Mantic Minotaur)

Package: lumpy-sv
Architecture: amd64
Version: 0.3.1+dfsg-7build1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 440
Depends: libbamtools2.5.2 (>= 2.5.2+dfsg), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgzstream0 (>= 1.5+dfsg), libhts3 (>= 1.10), libstdc++6 (>= 11), python3:any, samblaster, samtools, python3, python3-pysam, python3-numpy, bamkit
Recommends: sambamba
Filename: pool/universe/l/lumpy-sv/lumpy-sv_0.3.1+dfsg-7build1_amd64.deb
Size: 141374
MD5sum: 6a773e0b2c984ed2728d2ef5af567234
SHA1: 0bd9c5a18b83972811fd4bc9fdc2c7a4be6cde16
SHA256: d123148ae417ed12b34ea4b1e7fb3cfd4f5b3eddc6d7b2fa1aa07cb06469c300
SHA512: f65ccbf34e0487183ba47c8adc0079e04a40faead0421d4a24a3941bf7e12fb8d7f7ac1469b0a762b01b580d7479823ff300fa3969aa8fe6944af8c4086134d6
Homepage: https://github.com/arq5x/lumpy-sv
Description: general probabilistic framework for structural variant discovery
Description-md5: 815516aa8931beee4eee9025a0f06630