How to Install and Uninstall lumpy-sv Package on Ubuntu 22.10 (Kinetic Kudu)

Last updated: December 28,2024

1. Install "lumpy-sv" package

This guide covers the steps necessary to install lumpy-sv on Ubuntu 22.10 (Kinetic Kudu)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                lumpy-sv
            
                    
    
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2. Uninstall "lumpy-sv" package

This guide let you learn how to uninstall lumpy-sv on Ubuntu 22.10 (Kinetic Kudu):


    
        
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                sudo apt remove
            
                        
                lumpy-sv
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the lumpy-sv package on Ubuntu 22.10 (Kinetic Kudu)

Package: lumpy-sv
Architecture: amd64
Version: 0.3.1+dfsg-6
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 427
Depends: libbamtools2.5.1 (>= 2.5.1+dfsg), libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libgzstream0 (>= 1.5+dfsg), libhts3 (>= 1.10), libstdc++6 (>= 11), python3:any, samblaster, samtools, python3, python3-pysam, python3-numpy, bamkit
Recommends: sambamba
Filename: pool/universe/l/lumpy-sv/lumpy-sv_0.3.1+dfsg-6_amd64.deb
Size: 138866
MD5sum: 91e103db5513865e4d342094ee832421
SHA1: 233c423a1f14cfa2601b4b99e9555caa29085323
SHA256: 8e1e5825cfd6d35c940b518645a5e95b00cf7a2879848170bb4ee59cc7babea0
SHA512: 543dc8f8b74676ced4844641c18722e6f84bb139ba0e1782b1be0af4279b4b1a446a888cebc4ec1f44ac030276e676fa7f0f30a47edafd1266db7642f83b99bb
Homepage: https://github.com/arq5x/lumpy-sv
Description: general probabilistic framework for structural variant discovery
Description-md5: 815516aa8931beee4eee9025a0f06630