How to Install and Uninstall r-bioc-shortread Package on Ubuntu 21.10 (Impish Indri)

Last updated: May 15,2024

1. Install "r-bioc-shortread" package

Please follow the guidelines below to install r-bioc-shortread on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

Please follow the steps below to uninstall r-bioc-shortread on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-shortread package on Ubuntu 21.10 (Impish Indri)

Package: r-bioc-shortread
Architecture: amd64
Version: 1.48.0-2
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 7461
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-bioc-zlibbioc, r-cran-lattice, r-cran-latticeextra, r-bioc-xvector, r-bioc-rhtslib, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: r-cran-runit
Suggests: r-bioc-biocstyle, r-bioc-biomart, r-bioc-genomicfeatures
Filename: pool/universe/r/r-bioc-shortread/r-bioc-shortread_1.48.0-2_amd64.deb
Size: 5129620
MD5sum: 4cbd72814a0a7df9a64f9741b0a03aa0
SHA1: 53560ceb88a262e71af0a9640513052218c9c449
SHA256: ae00369fada713f94e7d5121ce5cc768358b76089778000cb74e8af366def1be
SHA512: 711a66d05e97b71549702795e1bcc1bab5a16788fc933440b9d499d4634123c0da2bdf88ff1ea92b4d47babeca5947a2f7249714d35a03edda111d44ec8728cc
Homepage: https://bioconductor.org/packages/ShortRead/
Description-en: GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment,
manipulation and output of high-throughput sequencing data. ShortRead is
provided in the R and Bioconductor environments, allowing ready access
to additional facilities for advanced statistical analysis, data
transformation, visualization and integration with diverse genomic
resources.
Description-md5: 1c554de1b3611a116df744777d39ea79