How to Install and Uninstall pigx-rnaseq Package on Ubuntu 22.10 (Kinetic Kudu)

Last updated: May 17,2024

1. Install "pigx-rnaseq" package

Please follow the instructions below to install pigx-rnaseq on Ubuntu 22.10 (Kinetic Kudu)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                pigx-rnaseq
            
                    
    
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2. Uninstall "pigx-rnaseq" package

This is a short guide on how to uninstall pigx-rnaseq on Ubuntu 22.10 (Kinetic Kudu):


    
        
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                sudo apt remove
            
                        
                pigx-rnaseq
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the pigx-rnaseq package on Ubuntu 22.10 (Kinetic Kudu)

Package: pigx-rnaseq
Architecture: all
Version: 0.0.19+ds-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 160
Depends: fastp, fastqc, hisat2 | rna-star, libjs-jquery-datatables, libjs-jquery-tablesorter, multiqc, pandoc-citeproc, python3:any, python3-deeptools, python3-htseq, r-bioc-deseq2, r-bioc-rtracklayer, r-bioc-summarizedexperiment, r-bioc-tximport, r-cran-corrplot, r-cran-crosstalk, r-cran-data.table, r-cran-dt (>= 0.15+dfsg-2), r-cran-ggplot2, r-cran-ggpubr, r-cran-ggrepel, r-cran-gprofiler2, r-cran-pheatmap, r-cran-plotly, r-cran-reshape2, r-cran-rjson, r-cran-rlang, r-cran-rmarkdown, r-cran-scales, salmon, samtools, snakemake, trim-galore
Recommends: hisat2, rna-star
Filename: pool/universe/p/pigx-rnaseq/pigx-rnaseq_0.0.19+ds-1_all.deb
Size: 49002
MD5sum: 02c5bf9ca3575989c3bfc96f2be85864
SHA1: b29537cda8214f1675daef906854af1de62e4b16
SHA256: 0feead8c8c420028cc5bc145bc8e2ff2217de38b6ede01a20f3358153e8a9b8b
SHA512: 03fb1c78c1700a9c61ad071a9c415e230961111e3c7f00231f22b431ec33cba1c0ec4ba435471165f8935dba6bd7d79d9e75a8f00d85f6f3640aa09ba3772d91
Homepage: https://github.com/BIMSBbioinfo/pigx_rnaseq
Description: pipeline for checkpointed and distributed RNA-seq analyses
Description-md5: e48b7ff1eb2b189a5bedb2ce0c32035c