How to Install and Uninstall r-bioc-shortread Package on Debian 10 (Buster)

Last updated: November 05,2024

1. Install "r-bioc-shortread" package

Please follow the steps below to install r-bioc-shortread on Debian 10 (Buster)


    
        
            $
        

        
            
                sudo apt update
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
    Copied

2. Uninstall "r-bioc-shortread" package

Please follow the guidelines below to uninstall r-bioc-shortread on Debian 10 (Buster):


    
        
            $
        

        
            
                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-shortread package on Debian 10 (Buster)

Package: r-bioc-shortread
Version: 1.40.0-1
Installed-Size: 7350
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-base-core (>= 3.5.1-1), r-api-3.5, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-cran-lattice, r-cran-latticeextra, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libgomp1 (>= 4.2.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: r-cran-runit
Suggests: r-bioc-biomart, r-bioc-genomicfeatures
Description: GNU R classes and methods for high-throughput short-read sequencing data
Description-md5: 1c554de1b3611a116df744777d39ea79
Homepage: https://bioconductor.org/packages/ShortRead/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-shortread/r-bioc-shortread_1.40.0-1_amd64.deb
Size: 5022640
MD5sum: e0d1a51db99ca15a2c43391d20395f6f
SHA256: 34bb10d38a20f452f3d97b65dcc7fea97e704664ee1074893d45f3db67815840