How to Install and Uninstall r-bioc-shortread Package on Debian 11 (Bullseye)

Last updated: January 23,2025

1. Install "r-bioc-shortread" package

Please follow the steps below to install r-bioc-shortread on Debian 11 (Bullseye)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

This tutorial shows how to uninstall r-bioc-shortread on Debian 11 (Bullseye):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-shortread package on Debian 11 (Bullseye)

Package: r-bioc-shortread
Version: 1.48.0-2
Installed-Size: 7462
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-base-core (>= 4.0.3-1), r-api-4.0, r-api-bioc-3.12, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-bioc-zlibbioc, r-cran-lattice, r-cran-latticeextra, r-bioc-xvector, r-bioc-rhtslib, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: r-cran-runit
Suggests: r-bioc-biocstyle, r-bioc-biomart, r-bioc-genomicfeatures
Description: GNU R classes and methods for high-throughput short-read sequencing data
Description-md5: 1c554de1b3611a116df744777d39ea79
Homepage: https://bioconductor.org/packages/ShortRead/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-shortread/r-bioc-shortread_1.48.0-2_amd64.deb
Size: 5133620
MD5sum: f7ed07d254fa0283dcf03affdd681e0c
SHA256: a78dd6f72fe0546736fbe7ddc5069110c578df6870557e38889817d4653a4d64