How to Install and Uninstall r-bioc-shortread Package on Ubuntu 16.04 LTS (Xenial Xerus)

Last updated: November 26,2024

1. Install "r-bioc-shortread" package

Here is a brief guide to show you how to install r-bioc-shortread on Ubuntu 16.04 LTS (Xenial Xerus)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

Please follow the step by step instructions below to uninstall r-bioc-shortread on Ubuntu 16.04 LTS (Xenial Xerus):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-shortread package on Ubuntu 16.04 LTS (Xenial Xerus)

Package: r-bioc-shortread
Priority: optional
Section: universe/gnu-r
Installed-Size: 5927
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Architecture: amd64
Version: 1.28.0-1
Depends: r-base-core (>= 3.2.2-1), r-api-3, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4), r-cran-latticeextra, r-bioc-biobase (>= 2.26.0), r-bioc-genomicalignments (>= 1.6.0), r-cran-hwriter
Filename: pool/universe/r/r-bioc-shortread/r-bioc-shortread_1.28.0-1_amd64.deb
Size: 4193940
MD5sum: 3ab8fefab737560709b11b60dbe6d056
SHA1: 83989a473d87bee970e46655e1da05b529dd86bb
SHA256: 4cf9cac22a79137931a768ae660547f1d62c32405d26c33d0cd4863d63b7feeb
Description-en: GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment,
manipulation and output of high-throughput sequencing data. ShortRead is
provided in the R and Bioconductor environments, allowing ready access
to additional facilities for advanced statistical analysis, data
transformation, visualization and integration with diverse genomic
resources.
Description-md5: 1c554de1b3611a116df744777d39ea79
Homepage: http://www.bioconductor.org/packages/release/bioc/html/ShortRead.html
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Origin: Ubuntu