How to Install and Uninstall r-bioc-shortread Package on Ubuntu 20.04 LTS (Focal Fossa)

Last updated: November 05,2024

1. Install "r-bioc-shortread" package

Please follow the instructions below to install r-bioc-shortread on Ubuntu 20.04 LTS (Focal Fossa)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

Please follow the guidance below to uninstall r-bioc-shortread on Ubuntu 20.04 LTS (Focal Fossa):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
    Copied


    
        
            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
    Copied

3. Information about the r-bioc-shortread package on Ubuntu 20.04 LTS (Focal Fossa)

Package: r-bioc-shortread
Architecture: amd64
Version: 1.44.3-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 7343
Depends: r-base-core (>= 3.6.2-2), r-api-3.5, r-api-bioc-3.10, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-bioc-zlibbioc, r-cran-lattice, r-cran-latticeextra, r-bioc-xvector, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4)
Recommends: r-cran-runit
Suggests: r-bioc-biomart, r-bioc-genomicfeatures
Filename: pool/universe/r/r-bioc-shortread/r-bioc-shortread_1.44.3-1_amd64.deb
Size: 5015892
MD5sum: 3eeb9dde754c9c5722c2d08435154afa
SHA1: dbd2113e6ca2183695027a489d8613d011753cfa
SHA256: 6a9d7d0b47193348d10a0d85e499df3cb384d722c7a0d7914461c3e320095efd
Homepage: https://bioconductor.org/packages/ShortRead/
Description: GNU R classes and methods for high-throughput short-read sequencing data
Description-md5: 1c554de1b3611a116df744777d39ea79