How to Install and Uninstall r-bioc-shortread Package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Last updated: November 22,2024

You can also install and uninstall the r-bioc-shortread on the following distributions in the same way, as they are all based on the Ubuntu system

Kubuntu 22.04 LTS
Lubuntu 22.04 LTS
Xubuntu 22.04 LTS
Ubuntu MATE 22.04 LTS
Ubuntu Studio 22.04 LTS
Pop!_OS 22.04 LTS
Zorin OS 16 / Zorin OS 17
Ubuntu Budgie 22.04

1. Install "r-bioc-shortread" package

Learn how to install r-bioc-shortread on Ubuntu 22.04 LTS (Jammy Jellyfish)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

In this section, we are going to explain the necessary steps to uninstall r-bioc-shortread on Ubuntu 22.04 LTS (Jammy Jellyfish):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-shortread package on Ubuntu 22.04 LTS (Jammy Jellyfish)

Package: r-bioc-shortread
Architecture: amd64
Version: 1.52.0-1
Priority: optional
Section: universe/gnu-r
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian R Packages Maintainers
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 7471
Depends: r-base-core (>= 4.1.2-1ubuntu1), r-api-4.0, r-api-bioc-3.14, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-bioc-zlibbioc, r-cran-lattice, r-cran-latticeextra, r-bioc-xvector, r-bioc-rhtslib, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4)
Suggests: r-bioc-biocstyle, r-cran-runit, r-bioc-biomart, r-bioc-genomicfeatures
Filename: pool/universe/r/r-bioc-shortread/r-bioc-shortread_1.52.0-1_amd64.deb
Size: 5167332
MD5sum: b68440e5bd954a8882ed797a69e956c1
SHA1: 415a3a6152cc2ba67045ca2d97f1fe244750307b
SHA256: 611b69b87eb8dca8acf3b51671f9e98455ef858d27a722f78aba3e0e616e5b7e
SHA512: 7aea3dd24f99207c0334ed45c473f38d06224331b69c17db6ab53f7a05f9505763fe6cb5778014271c9e46c55d7e01e8524a3bcd0c9d65770e499d49c918c8f5
Homepage: https://bioconductor.org/packages/ShortRead/
Description: GNU R classes and methods for high-throughput short-read sequencing data
Description-md5: 1c554de1b3611a116df744777d39ea79