How to Install and Uninstall r-bioc-shortread Package on Debian 12 (Bookworm)

Last updated: May 16,2024

You can also install and uninstall the r-bioc-shortread on the following distributions in the same way, as they are all based on the Debian system

MX Linux 23
SparkyLinux

1. Install "r-bioc-shortread" package

This is a short guide on how to install r-bioc-shortread on Debian 12 (Bookworm)


    
        
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                sudo apt update
            
                    
    
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            $
        

        
            
                sudo apt install
            
                        
                r-bioc-shortread
            
                    
    
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2. Uninstall "r-bioc-shortread" package

This guide let you learn how to uninstall r-bioc-shortread on Debian 12 (Bookworm):


    
        
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                sudo apt remove
            
                        
                r-bioc-shortread
            
                    
    
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            $
        

        
            
                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the r-bioc-shortread package on Debian 12 (Bookworm)

Package: r-bioc-shortread
Version: 1.56.1-1
Installed-Size: 7491
Maintainer: Debian R Packages Maintainers
Architecture: amd64
Depends: r-base-core (>= 4.2.2.20221110-1), r-api-4.0, r-api-bioc-3.16, r-bioc-biocgenerics (>= 0.23.3), r-bioc-biocparallel, r-bioc-biostrings (>= 2.47.6), r-bioc-rsamtools (>= 1.31.2), r-bioc-genomicalignments (>= 1.15.6), r-bioc-biobase, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb (>= 1.15.2), r-bioc-genomicranges (>= 1.31.8), r-cran-hwriter, r-bioc-zlibbioc, r-cran-lattice, r-cran-latticeextra, r-bioc-xvector, r-bioc-rhtslib, libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4)
Suggests: r-bioc-biocstyle, r-cran-runit, r-bioc-biomart, r-bioc-genomicfeatures
Description: GNU R classes and methods for high-throughput short-read sequencing data
Description-md5: 1c554de1b3611a116df744777d39ea79
Homepage: https://bioconductor.org/packages/ShortRead/
Section: gnu-r
Priority: optional
Filename: pool/main/r/r-bioc-shortread/r-bioc-shortread_1.56.1-1_amd64.deb
Size: 5163460
MD5sum: c6febbd201548ecb61f383c6e4304cf5
SHA256: 77e4f7d4fbc234df0fcc60f6e389c1cbdb18fe03174603a85eb02955d6d58c9b