How to Install and Uninstall libtfbs-perl Package on Ubuntu 21.10 (Impish Indri)

Last updated: November 22,2024

1. Install "libtfbs-perl" package

Please follow the guidance below to install libtfbs-perl on Ubuntu 21.10 (Impish Indri)


    
        
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                sudo apt update
            
                    
    
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                sudo apt install
            
                        
                libtfbs-perl
            
                    
    
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2. Uninstall "libtfbs-perl" package

Please follow the step by step instructions below to uninstall libtfbs-perl on Ubuntu 21.10 (Impish Indri):


    
        
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                sudo apt remove
            
                        
                libtfbs-perl
            
                    
    
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                sudo apt autoclean && sudo apt autoremove
            
                    
    
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3. Information about the libtfbs-perl package on Ubuntu 21.10 (Impish Indri)

Package: libtfbs-perl
Architecture: amd64
Version: 0.7.1-3build1
Priority: optional
Section: universe/perl
Origin: Ubuntu
Maintainer: Ubuntu Developers
Original-Maintainer: Debian Med Packaging Team
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 988
Depends: perl (>= 5.32.0-4), perlapi-5.32.0, pdl (>= 1:2.021-2build1), pdlapi-12, libc6 (>= 2.14), bioperl, libwww-perl, libdbi-perl
Recommends: libgd-gd2-perl | libgd-gd2-noxpm-perl
Filename: pool/universe/libt/libtfbs-perl/libtfbs-perl_0.7.1-3build1_amd64.deb
Size: 231740
MD5sum: a19806f05ec565faeef843481072c058
SHA1: 307428cc8de4510bfba56b98871f9812e591fd11
SHA256: 21acf62afc84fff9e0a0096fd32543b4a17a3df6d918bafd92e9fff0f58e6985
SHA512: d1ab48fb1704dc701579db1f315e2373ed4d60aa5a522f395cd638f21eaff945c8a04107ebf4ad70dfdf9b389d391451d5bfb6adfb97df2acf6120662c1e014d
Homepage: http://tfbs.genereg.net
Description-en: scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
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If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
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Note: the TFBS perl module is no longer under active development. All the
functionality can be found in the TFBSTools Bioconductor package; users are
highly encouraged to switch.
Description-md5: 329310953f967bb54344ec3b1c418600